napari-nuclephaser

Installation instructions

  • Installation instructions

Biological tasks guidelines

  • Population growth curves
  • Individual cells tracking

General information

  • Object detection overview
  • Overview of sliced inference approach
  • Confidence threshold calibration
  • Test-time augmentations (TTA)

Widgets

  • Predict on single image
  • Predict on 1-stack
  • Predict on 2-stack
  • Calibrate with known number
  • Calibrate with DAPI
  • Calibrate with points
  • Convert points to labels
  • Count points on images
napari-nuclephaser
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